Arabidopsis Coexpression Tool

Arabidopsis thaliana

Zogopoulos, V.L., Papadopoulos, K., Malatras, A., Iconomidou, V.A., and Michalopoulos, I. (2025). ACT2.6: Global Gene Coexpression Network in Arabidopsis thaliana Using WGCNA. Genes 16, 258.

Zogopoulos, V.L., Saxami, G., Malatras, A., Angelopoulou, A., Jen, C.H., Duddy, W.J., Daras, G., Hatzopoulos, P., Westhead, D.R., and Michalopoulos, I. (2021). ACT: A tool for gene coexpression analysis in Arabidopsis thaliana. iScience 24, 102848.
Zogopoulos, V.L., Malatras, A., and Michalopoulos, I. (2022). Gene coexpression analysis in Arabidopsis thaliana based on public microarray data. STAR Protoc 3, 101208.
Zogopoulos, V.L., Saxami, G., Malatras, A., Papadopoulos, K., Tsotra, I., Iconomidou, V.A., and Michalopoulos, I. (2022). Approaches in Gene Coexpression Analysis in Eukaryotes. Biology 11, 1019.

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The Arabidopsis Coexpression Tool (ACT) is based on the coexpression analysis of 21273 Arabidopsis thaliana genes from gene pair correlation data of 3500 Affymetrix Arabidopsis ATH1 Genome Array Chip microarray samples.
Input the Gene ID (e.g. AT2G36620) or Gene Symbol (e.g. RPL24A) of your gene of interest. To find Gene IDs or Gene names, search ThaleMine using names, identifiers or keywords for genes, proteins, ontology terms, authors, etc.		(By typing the start of the Gene ID or Symbol, up to 10 matches will be suggested)