paleturquoise

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Trait PCC P value
Rosette leaf 0.19 7.0⋅10-29
Pollen 0.09 1.0⋅10-7
Microsporocyte 0.084 6.0⋅10-7
Cell culture 0.063 2.0⋅10-4
Pollen tube 0.061 3.0⋅10-4
Rosette -0.074 1.0⋅10-5
Seedling -0.19 9.0⋅10-29
Module Enrichments

Gene Ontology: Biological Process
Rank Pvalue Hits Over-representation Accession Biological Process
Gene Ontology: Molecular Function
Rank Pvalue Hits Over-representation Accession Molecular Function
1 6.2⋅10-3 2/11 (18.2%) 110.5 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
Gene Ontology: Cellular Component
Rank Pvalue Hits Over-representation Accession Cellular Component
Plant Ontology: Plant Anatomy
Rank Pvalue Hits Over-representation Accession Plant Anatomy
Plant Ontology: Plant Structure Development Stage
Rank Pvalue Hits Over-representation Accession Plant Structure Development Stage
WikiPathways
Rank Pvalue Hits Over-representation WikiPathways Description
KEGG
Rank Pvalue Hits Over-representation Entry Name
1 1.0⋅10-2 2/45 (4.4%) 25.4 ath04130 SNARE interactions in vesicular transport - Arabidopsis thaliana (thale cress)
2 3.4⋅10-2 2/121 (1.7%) 9.5 ath04120 Ubiquitin mediated proteolysis - Arabidopsis thaliana (thale cress)
AraCyc
Rank Pvalue Hits Over-representation PathwayID Pathway Name
1 3.4⋅10-4 2/21 (9.5%) 64.3 TRESYN-PWY trehalose biosynthesis I
AtRegNet
Rank Pvalue Hits Over-representation TF Symbol TF Name TF Description
Plant Cistrome Database
Rank Pvalue Hits Over-representation TF Symbol TF Name TF Description
1 4.5⋅10-2 48/10344 (0.5%) 1.5 RTV1 related to vernalization1 1 related to vernalization1 1
Pfam
Rank Pvalue Hits Over-representation Family Summary
1 4.0⋅10-4 2/11 (18.2%) 93 Glyco_transf_20 Glycosyltransferase family 20
2 7.6⋅10-4 2/21 (9.5%) 48.7 Trehalose_PPase Trehalose-phosphatase
paleturquoise Module: 67 genes
Probeset Symbol Name Description Average Ranking
AT5G24440_at CID13 CTC-interacting domain 13 CTC-interacting domain 13 13.11214313113
AT1G50080_at AT1G50080 ribonuclease 13.620773741027
AT4G21050_at DOF4.4 DNA-binding with One Finger 4.4 Dof-type zinc finger domain-containing protein 14.243985971834
AT1G19060_at AT1G19060 hypothetical protein (DUF626) 15.466655707162
AT5G17950_at AT5G17950 disease resistance protein 16.313441832429
AT5G49750_at AT5G49750 Leucine-rich repeat (LRR) family protein 16.835114252836
AT3G44780_at AT3G44780 Cysteine proteinases superfamily protein 18.709874513672
AT5G37900_at AT5G37900 TRAF-like superfamily protein 19.697791659817
AT1G16980_at TPS2 trehalose-phosphatase/synthase 2 trehalose-6-phosphate synthase 20.187791111842
AT5G58180_at ATYKT62 Synaptobrevin family protein 20.550167132446
AT5G56800_at AT5G56800 Protein with RNI-like/FBD-like domain 21.186421173763
AT2G11390_at AT2G11390 transposable_element_gene 21.689462436298
AT5G39620_at RABG1 RAB GTPase homolog G1 RAB GTPase homolog G1 21.768179078306
AT4G07970_at AT4G07970 transposable_element_gene 21.903254972875
AT3G14820_at AT3G14820 GDSL-like Lipase/Acylhydrolase superfamily protein 24.00904159132
AT5G12450_at AT5G12450 FBD-like domain family protein 24.386322538221
AT2G37610_at AT2G37610 hypothetical protein 24.63178804318
AT2G02550_at AT2G02550 PIN domain-like family protein 24.909858074415
AT1G17000_at TPS3 trehalose-phosphatase/synthase 3 trehalose-phosphatase/synthase 3 25.231245547701
AT2G05950_at AT2G05950 transposable_element_gene 25.301578168667
AT5G06650_at GIS2 GLABROUS INFLORESCENCE STEMS 2 C2H2 and C2HC zinc fingers superfamily protein 26.464628198805
AT2G25990_at AT2G25990 hypothetical protein 26.566168009206
AT5G39870_at AT5G39870 hypothetical protein (DUF1216) 27.520083292235
AT1G68630_at AT1G68630 PLAC8 family protein 27.527535755384
AT4G20290_at AT4G20290 transmembrane protein 27.828428955011
AT2G18870_at VEL3 vernalization5/VIN3-like 3 vernalization5/VIN3-like protein 28.052002849471
AT4G23110_at AT4G23110 insulin-like growth factor binding protein 28.909036111568
AT1G36000_at LBD5 LOB domain-containing protein 5 LOB domain-containing protein 5 29.351060332073
AT4G13380_at MEE56 maternal effect embryo arrest 56 Heavy metal transport/detoxification superfamily protein 30.705079730396
AT4G33310_at AT4G33310 hypothetical protein 31.107978519371
AT2G07110_at AT2G07110 exosome complex exonuclease RRP46-like protein 31.20253164557
AT1G23610_at AT1G23610 hypothetical protein 31.2924269823
AT4G13080_at XTH1 xyloglucan endotransglucosylase/hydrolase 1 xyloglucan endotransglucosylase/hydrolase 1 31.404679708477
AT1G67270_at AT1G67270 Zinc-finger domain of monoamine-oxidase A repressor R1 protein 31.499232834676
AT2G01780_at AT2G01780 Curculin-like (mannose-binding) lectin family protein 31.67436571867
AT4G04730_at AT4G04730 Ta11-like non-LTR retrotransposon 33.348375253439
AT2G03180_at AT2G03180 hypothetical protein 33.388898021809
AT1G33000_at AT1G33000 transposable_element_gene 33.761055400296
AT1G35183_at AT1G35183 zinc finger, C3HC4 type (RING finger) protein 33.921749136939
AT1G32570_at AT1G32570 hypothetical protein 34.006520905255
AT2G01800_at AT2G01800 COP1-interacting protein-like protein 34.070798399912
AT1G43140_at AT1G43140 Cullin family protein 34.14811770508
AT4G08140_at AT4G08140 26S proteasome non-ATPase regulatory subunit-like protein 34.58501835717
AT2G02520_at AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 34.985122472464
AT5G48750_at AT5G48750 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 36.417858512795
AT5G07880_at SNAP29 synaptosomal-associated protein SNAP25-like 29 synaptosomal-associated protein SNAP25-like 29 36.73225930188
AT5G28880_at AT5G28880 transposable_element_gene 39.36856814072
AT2G26320_at AGL33 AGAMOUS-like 33 AGAMOUS-like 33 40.747273823223
AT5G22960_at AT5G22960 alpha/beta-Hydrolases superfamily protein 43.548934188175
AT2G36040_at AT2G36040 transposable_element_gene 43.561044440791
AT3G26870_at AT3G26870 Plant self-incompatibility protein S1 family 44.710586881473
AT5G35510_at AT5G35510 TIR-NBS-LRR class disease resistance protein 45.250424680804
AT2G20070_at AT2G20070 defensin-like protein 45.512658227848
AT4G24860_at AT4G24860 P-loop containing nucleoside triphosphate hydrolases superfamily protein 46.674776700093
AT2G18830_at AT2G18830 RNA-binding (RRM/RBD/RNP motif) family protein 46.91325552085
AT4G17660_at AT4G17660 Protein kinase superfamily protein 47.604005698942
AT3G25750_at AT3G25750 F-box SKIP23-like protein (DUF295) 47.715792646172
AT1G14688_at AT1G14688 E3 ubiquitin ligase 49.73261548578
AT3G62380_at AT3G62380 F-box/associated interaction domain protein 49.818784590936
AT2G03130_at AT2G03130 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 52.895720313442
AT5G40920_at AT5G40920 pseudogene of Disease resistance protein (TIR-NBS-LRR class) family 55.620061373226
AT1G42700_at AT1G42700 hypothetical protein 56.276809688202
AT3G29140_at AT3G29140 hypothetical protein 56.608444298318
AT1G02580_at MEA MEDEA SET domain-containing protein 57.022056003069
AT4G13260_at YUC2 YUCCA2 Flavin-binding monooxygenase family protein 58.785029316675
AT5G46010_at AT5G46010 Homeodomain-like superfamily protein 60.945777850841
AT2G20500_at AT2G20500 hypothetical protein 64.461477341224

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