yellowgreen⬤ |
||
|---|---|---|
| Trait | PCC | P value |
| Rosette leaf | 0.23 | 4.0⋅10-44 |
| Leaf | 0.21 | 2.0⋅10-36 |
| Aerial tissue | 0.16 | 6.0⋅10-22 |
| Seedling | 0.076 | 7.0⋅10-6 |
| Flower | 0.066 | 1.0⋅10-4 |
| Pollen tube | -0.065 | 1.0⋅10-4 |
| Embryo | -0.067 | 8.0⋅10-5 |
| Stamen | -0.073 | 2.0⋅10-5 |
| Lateral root | -0.086 | 3.0⋅10-7 |
| Pollen | -0.086 | 4.0⋅10-7 |
| Starch sheath | -0.09 | 9.0⋅10-8 |
| Seed | -0.094 | 3.0⋅10-8 |
| Root tip | -0.098 | 7.0⋅10-9 |
| Cell culture | -0.16 | 1.0⋅10-22 |
| Root | -0.44 | 4.0⋅10-164 |
| Module Enrichments |
|---|
| Gene Ontology: Biological Process | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Accession | Biological Process |
| 1 | 6.6⋅10-21 | 19/231 (8.2%) | 26.7 | GO:0015979 | photosynthesis |
| 2 | 4.3⋅10-17 | 14/123 (11.4%) | 37 | GO:0019684 | photosynthesis, light reaction |
| 3 | 4.0⋅10-14 | 16/323 (5.0%) | 16.1 | GO:0006091 | generation of precursor metabolites and energy |
| 4 | 9.0⋅10-12 | 10/95 (10.5%) | 34.2 | GO:0022900 | electron transport chain |
| 5 | 9.6⋅10-11 | 8/52 (15.4%) | 50 | GO:0009767 | photosynthetic electron transport chain |
| 6 | 1.6⋅10-9 | 5/10 (50.0%) | 162.4 | GO:0009772 | photosynthetic electron transport in photosystem II |
| 7 | 1.1⋅10-6 | 11/425 (2.6%) | 8.4 | GO:0006414 | translational elongation |
| 8 | 1.2⋅10-6 | 5/34 (14.7%) | 47.8 | GO:0018298 | protein-chromophore linkage |
| 9 | 7.1⋅10-6 | 18/1597 (1.1%) | 3.7 | GO:0055114 | oxidation-reduction process |
| 10 | 1.3⋅10-5 | 15/1140 (1.3%) | 4.3 | GO:1901566 | organonitrogen compound biosynthetic process |
| 11 | 1.6⋅10-5 | 4/26 (15.4%) | 50 | GO:0015985 | energy coupled proton transport, down electrochemical gradient |
| 12 | 1.6⋅10-5 | 4/26 (15.4%) | 50 | GO:0015986 | ATP synthesis coupled proton transport |
| 13 | 2.8⋅10-5 | 6/129 (4.7%) | 15.1 | GO:0046034 | ATP metabolic process |
| 14 | 2.8⋅10-5 | 11/636 (1.7%) | 5.6 | GO:0043043 | peptide biosynthetic process |
| 15 | 2.8⋅10-5 | 11/632 (1.7%) | 5.7 | GO:0006412 | translation |
| 16 | 2.8⋅10-5 | 17/1608 (1.1%) | 3.4 | GO:1901564 | organonitrogen compound metabolic process |
| 17 | 3.2⋅10-5 | 6/136 (4.4%) | 14.3 | GO:0009144 | purine nucleoside triphosphate metabolic process |
| 18 | 3.2⋅10-5 | 6/135 (4.4%) | 14.4 | GO:0009205 | purine ribonucleoside triphosphate metabolic process |
| 19 | 3.2⋅10-5 | 11/655 (1.7%) | 5.5 | GO:0043604 | amide biosynthetic process |
| 20 | 3.7⋅10-5 | 4/36 (11.1%) | 36.1 | GO:0006754 | ATP biosynthetic process |
| 21 | 4.1⋅10-5 | 6/145 (4.1%) | 13.4 | GO:0009199 | ribonucleoside triphosphate metabolic process |
| 22 | 4.6⋅10-5 | 6/155 (3.9%) | 12.6 | GO:0009126 | purine nucleoside monophosphate metabolic process |
| 23 | 4.6⋅10-5 | 6/155 (3.9%) | 12.6 | GO:0009167 | purine ribonucleoside monophosphate metabolic process |
| 24 | 4.6⋅10-5 | 4/41 (9.8%) | 31.7 | GO:0009145 | purine nucleoside triphosphate biosynthetic process |
| 25 | 4.6⋅10-5 | 4/41 (9.8%) | 31.7 | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process |
| 26 | 4.6⋅10-5 | 11/705 (1.6%) | 5.1 | GO:0006518 | peptide metabolic process |
| 27 | 4.6⋅10-5 | 8/331 (2.4%) | 7.8 | GO:0034622 | cellular protein-containing complex assembly |
| 28 | 4.6⋅10-5 | 6/151 (4.0%) | 12.9 | GO:0009141 | nucleoside triphosphate metabolic process |
| 29 | 4.7⋅10-5 | 39/8375 (0.5%) | 1.5 | GO:0044237 | cellular metabolic process |
| 30 | 4.7⋅10-5 | 2/2 (100.0%) | 324.8 | GO:0006175 | dATP biosynthetic process |
| 31 | 4.7⋅10-5 | 2/2 (100.0%) | 324.8 | GO:0006176 | dATP biosynthetic process from ADP |
| 32 | 4.7⋅10-5 | 2/2 (100.0%) | 324.8 | GO:0009153 | purine deoxyribonucleotide biosynthetic process |
| 33 | 4.7⋅10-5 | 2/2 (100.0%) | 324.8 | GO:0009216 | purine deoxyribonucleoside triphosphate biosynthetic process |
| 34 | 4.7⋅10-5 | 2/2 (100.0%) | 324.8 | GO:0046060 | dATP metabolic process |
| 35 | 5.5⋅10-5 | 11/745 (1.5%) | 4.8 | GO:0043603 | cellular amide metabolic process |
| 36 | 6.6⋅10-5 | 6/173 (3.5%) | 11.3 | GO:0009161 | ribonucleoside monophosphate metabolic process |
| 37 | 7.1⋅10-5 | 6/176 (3.4%) | 11.1 | GO:0046128 | purine ribonucleoside metabolic process |
| 38 | 7.2⋅10-5 | 6/178 (3.4%) | 10.9 | GO:0009123 | nucleoside monophosphate metabolic process |
| 39 | 7.2⋅10-5 | 6/178 (3.4%) | 10.9 | GO:0042278 | purine nucleoside metabolic process |
| 40 | 7.5⋅10-5 | 8/382 (2.1%) | 6.8 | GO:0065003 | protein-containing complex assembly |
| 41 | 7.5⋅10-5 | 6/181 (3.3%) | 10.8 | GO:0009150 | purine ribonucleotide metabolic process |
| 42 | 7.5⋅10-5 | 4/51 (7.8%) | 25.5 | GO:0009201 | ribonucleoside triphosphate biosynthetic process |
| 43 | 8.1⋅10-5 | 6/185 (3.2%) | 10.5 | GO:0006163 | purine nucleotide metabolic process |
| 44 | 8.7⋅10-5 | 4/54 (7.4%) | 24.1 | GO:0009142 | nucleoside triphosphate biosynthetic process |
| 45 | 9.0⋅10-5 | 42/10212 (0.4%) | 1.3 | GO:0008152 | metabolic process |
| 46 | 1.0⋅10-4 | 2/3 (66.7%) | 216.5 | GO:0009151 | purine deoxyribonucleotide metabolic process |
| 47 | 1.0⋅10-4 | 2/3 (66.7%) | 216.5 | GO:0009215 | purine deoxyribonucleoside triphosphate metabolic process |
| 48 | 1.1⋅10-4 | 4/59 (6.8%) | 22 | GO:0009127 | purine nucleoside monophosphate biosynthetic process |
| 49 | 1.1⋅10-4 | 4/59 (6.8%) | 22 | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process |
| 50 | 1.1⋅10-4 | 5/119 (4.2%) | 13.6 | GO:1902600 | proton transmembrane transport |
| 51 | 1.1⋅10-4 | 6/202 (3.0%) | 9.6 | GO:0009259 | ribonucleotide metabolic process |
| 52 | 1.1⋅10-4 | 6/203 (3.0%) | 9.6 | GO:0009119 | ribonucleoside metabolic process |
| 53 | 1.4⋅10-4 | 6/212 (2.8%) | 9.2 | GO:0072521 | purine-containing compound metabolic process |
| 54 | 1.4⋅10-4 | 4/65 (6.2%) | 20 | GO:0042451 | purine nucleoside biosynthetic process |
| 55 | 1.4⋅10-4 | 4/65 (6.2%) | 20 | GO:0046129 | purine ribonucleoside biosynthetic process |
| 56 | 1.6⋅10-4 | 6/220 (2.7%) | 8.9 | GO:0009116 | nucleoside metabolic process |
| 57 | 1.6⋅10-4 | 3/24 (12.5%) | 40.6 | GO:0006354 | DNA-templated transcription, elongation |
| 58 | 1.7⋅10-4 | 2/4 (50.0%) | 162.4 | GO:0009202 | deoxyribonucleoside triphosphate biosynthetic process |
| 59 | 1.8⋅10-4 | 6/225 (2.7%) | 8.7 | GO:0019693 | ribose phosphate metabolic process |
| 60 | 2.5⋅10-4 | 2/5 (40.0%) | 129.9 | GO:0009265 | 2'-deoxyribonucleotide biosynthetic process |
| 61 | 2.5⋅10-4 | 2/5 (40.0%) | 129.9 | GO:0046385 | deoxyribose phosphate biosynthetic process |
| 62 | 2.5⋅10-4 | 2/5 (40.0%) | 129.9 | GO:0009769 | photosynthesis, light harvesting in photosystem II |
| 63 | 2.5⋅10-4 | 4/77 (5.2%) | 16.9 | GO:0009152 | purine ribonucleotide biosynthetic process |
| 64 | 2.5⋅10-4 | 4/77 (5.2%) | 16.9 | GO:0009156 | ribonucleoside monophosphate biosynthetic process |
| 65 | 2.6⋅10-4 | 4/79 (5.1%) | 16.4 | GO:0006164 | purine nucleotide biosynthetic process |
| 66 | 3.0⋅10-4 | 4/82 (4.9%) | 15.8 | GO:0009124 | nucleoside monophosphate biosynthetic process |
| 67 | 3.4⋅10-4 | 4/85 (4.7%) | 15.3 | GO:0072522 | purine-containing compound biosynthetic process |
| 68 | 3.5⋅10-4 | 2/6 (33.3%) | 108.3 | GO:0009394 | 2'-deoxyribonucleotide metabolic process |
| 69 | 3.5⋅10-4 | 2/6 (33.3%) | 108.3 | GO:0019692 | deoxyribose phosphate metabolic process |
| 70 | 3.7⋅10-4 | 4/88 (4.5%) | 14.8 | GO:0009163 | nucleoside biosynthetic process |
| 71 | 3.7⋅10-4 | 4/88 (4.5%) | 14.8 | GO:0042455 | ribonucleoside biosynthetic process |
| 72 | 4.0⋅10-4 | 6/271 (2.2%) | 7.2 | GO:1901657 | glycosyl compound metabolic process |
| 73 | 4.4⋅10-4 | 4/93 (4.3%) | 14 | GO:1901659 | glycosyl compound biosynthetic process |
| 74 | 4.4⋅10-4 | 8/531 (1.5%) | 4.9 | GO:0022607 | cellular component assembly |
| 75 | 4.4⋅10-4 | 2/7 (28.6%) | 92.8 | GO:0009200 | deoxyribonucleoside triphosphate metabolic process |
| 76 | 4.8⋅10-4 | 6/282 (2.1%) | 6.9 | GO:0009117 | nucleotide metabolic process |
| 77 | 4.8⋅10-4 | 4/97 (4.1%) | 13.4 | GO:0009260 | ribonucleotide biosynthetic process |
| 78 | 4.8⋅10-4 | 4/97 (4.1%) | 13.4 | GO:0046390 | ribose phosphate biosynthetic process |
| 79 | 4.8⋅10-4 | 6/284 (2.1%) | 6.9 | GO:0006753 | nucleoside phosphate metabolic process |
| 80 | 5.4⋅10-4 | 3/40 (7.5%) | 24.4 | GO:0042255 | ribosome assembly |
| 81 | 5.5⋅10-4 | 2/8 (25.0%) | 81.2 | GO:0009263 | deoxyribonucleotide biosynthetic process |
| 82 | 6.9⋅10-4 | 2/9 (22.2%) | 72.2 | GO:0048564 | photosystem I assembly |
| 83 | 8.6⋅10-4 | 2/10 (20.0%) | 65 | GO:0009262 | deoxyribonucleotide metabolic process |
| 84 | 9.4⋅10-4 | 6/326 (1.8%) | 6 | GO:0055086 | nucleobase-containing small molecule metabolic process |
| 85 | 1.4⋅10-3 | 4/131 (3.1%) | 9.9 | GO:0009165 | nucleotide biosynthetic process |
| 86 | 1.5⋅10-3 | 4/133 (3.0%) | 9.8 | GO:1901293 | nucleoside phosphate biosynthetic process |
| 87 | 2.0⋅10-3 | 8/686 (1.2%) | 3.8 | GO:0043933 | protein-containing complex subunit organization |
| 88 | 2.1⋅10-3 | 2/16 (12.5%) | 40.6 | GO:0000028 | ribosomal small subunit assembly |
| 89 | 2.6⋅10-3 | 5/269 (1.9%) | 6 | GO:0070271 | obsolete protein complex biogenesis |
| 90 | 2.6⋅10-3 | 5/270 (1.9%) | 6 | GO:0098662 | inorganic cation transmembrane transport |
| 91 | 2.9⋅10-3 | 19/3183 (0.6%) | 1.9 | GO:0044271 | cellular nitrogen compound biosynthetic process |
| 92 | 3.3⋅10-3 | 9/929 (1.0%) | 3.1 | GO:0044085 | cellular component biogenesis |
| 93 | 3.4⋅10-3 | 3/79 (3.8%) | 12.3 | GO:0070925 | organelle assembly |
| 94 | 3.8⋅10-3 | 2/22 (9.1%) | 29.5 | GO:0017004 | cytochrome complex assembly |
| 95 | 4.7⋅10-3 | 5/312 (1.6%) | 5.2 | GO:0098660 | inorganic ion transmembrane transport |
| 96 | 4.7⋅10-3 | 2/25 (8.0%) | 26 | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient |
| 97 | 4.7⋅10-3 | 2/25 (8.0%) | 26 | GO:0042773 | ATP synthesis coupled electron transport |
| 98 | 4.8⋅10-3 | 5/315 (1.6%) | 5.2 | GO:0015672 | monovalent inorganic cation transport |
| 99 | 4.8⋅10-3 | 3/91 (3.3%) | 10.7 | GO:0022618 | ribonucleoprotein complex assembly |
| 100 | 5.0⋅10-3 | 2/26 (7.7%) | 25 | GO:0006119 | oxidative phosphorylation |
| 101 | 5.5⋅10-3 | 3/96 (3.1%) | 10.1 | GO:0071826 | ribonucleoprotein complex subunit organization |
| 102 | 6.8⋅10-3 | 40/10644 (0.4%) | 1.2 | GO:0009987 | cellular process |
| 103 | 6.8⋅10-3 | 2/31 (6.5%) | 21 | GO:0022904 | respiratory electron transport chain |
| 104 | 6.9⋅10-3 | 3/106 (2.8%) | 9.2 | GO:0045333 | cellular respiration |
| 105 | 6.9⋅10-3 | 6/504 (1.2%) | 3.9 | GO:0019637 | organophosphate metabolic process |
| 106 | 8.5⋅10-3 | 22/4375 (0.5%) | 1.6 | GO:0044249 | cellular biosynthetic process |
| 107 | 8.8⋅10-3 | 2/36 (5.6%) | 18 | GO:0009765 | photosynthesis, light harvesting |
| 108 | 1.0⋅10-2 | 3/125 (2.4%) | 7.8 | GO:0015980 | energy derivation by oxidation of organic compounds |
| 109 | 1.0⋅10-2 | 22/4455 (0.5%) | 1.6 | GO:1901576 | organic substance biosynthetic process |
| 110 | 1.0⋅10-2 | 6/554 (1.1%) | 3.5 | GO:1901135 | carbohydrate derivative metabolic process |
| 111 | 1.1⋅10-2 | 2/41 (4.9%) | 15.8 | GO:0042274 | ribosomal small subunit biogenesis |
| 112 | 1.3⋅10-2 | 4/263 (1.5%) | 4.9 | GO:0042254 | ribosome biogenesis |
| 113 | 1.3⋅10-2 | 5/414 (1.2%) | 3.9 | GO:0098655 | cation transmembrane transport |
| 114 | 1.5⋅10-2 | 21/4290 (0.5%) | 1.6 | GO:0034641 | cellular nitrogen compound metabolic process |
| 115 | 1.5⋅10-2 | 4/275 (1.5%) | 4.7 | GO:0090407 | organophosphate biosynthetic process |
| 116 | 1.7⋅10-2 | 4/286 (1.4%) | 4.5 | GO:1901137 | carbohydrate derivative biosynthetic process |
| 117 | 2.0⋅10-2 | 16/3002 (0.5%) | 1.7 | GO:0044267 | cellular protein metabolic process |
| 118 | 2.1⋅10-2 | 22/4736 (0.5%) | 1.5 | GO:0009058 | biosynthetic process |
| 119 | 2.2⋅10-2 | 4/313 (1.3%) | 4.2 | GO:0022613 | ribonucleoprotein complex biogenesis |
| 120 | 2.4⋅10-2 | 5/489 (1.0%) | 3.3 | GO:0006812 | cation transport |
| 121 | 2.6⋅10-2 | 2/67 (3.0%) | 9.7 | GO:0046031 | ADP metabolic process |
| 122 | 2.7⋅10-2 | 2/70 (2.9%) | 9.3 | GO:0009135 | purine nucleoside diphosphate metabolic process |
| 123 | 2.7⋅10-2 | 2/70 (2.9%) | 9.3 | GO:0009179 | purine ribonucleoside diphosphate metabolic process |
| 124 | 2.7⋅10-2 | 2/70 (2.9%) | 9.3 | GO:0009185 | ribonucleoside diphosphate metabolic process |
| 125 | 2.8⋅10-2 | 17/3411 (0.5%) | 1.6 | GO:0019538 | protein metabolic process |
| 126 | 3.4⋅10-2 | 2/79 (2.5%) | 8.2 | GO:0009132 | nucleoside diphosphate metabolic process |
| 127 | 3.6⋅10-2 | 21/4681 (0.4%) | 1.5 | GO:0006807 | nitrogen compound metabolic process |
| 128 | 3.8⋅10-2 | 12/2177 (0.6%) | 1.8 | GO:0006810 | transport |
| 129 | 3.9⋅10-2 | 12/2191 (0.5%) | 1.8 | GO:0051234 | establishment of localization |
| 130 | 4.9⋅10-2 | 5/603 (0.8%) | 2.7 | GO:0034220 | ion transmembrane transport |
| Gene Ontology: Molecular Function | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Accession | Molecular Function |
| 1 | 2.3⋅10-8 | 6/30 (20.0%) | 66.6 | GO:0048038 | quinone binding |
| 2 | 4.5⋅10-8 | 5/20 (25.0%) | 83.2 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
| 3 | 4.5⋅10-8 | 5/20 (25.0%) | 83.2 | GO:0050136 | NADH dehydrogenase (quinone) activity |
| 4 | 4.5⋅10-8 | 11/332 (3.3%) | 11 | GO:0003735 | structural constituent of ribosome |
| 5 | 4.5⋅10-8 | 6/38 (15.8%) | 52.5 | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| 6 | 6.4⋅10-8 | 4/8 (50.0%) | 166.4 | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| 7 | 2.4⋅10-7 | 5/29 (17.2%) | 57.4 | GO:0016168 | chlorophyll binding |
| 8 | 2.6⋅10-7 | 5/30 (16.7%) | 55.5 | GO:0003954 | NADH dehydrogenase activity |
| 9 | 2.7⋅10-7 | 8/168 (4.8%) | 15.8 | GO:0009055 | electron transfer activity |
| 10 | 4.9⋅10-7 | 11/452 (2.4%) | 8.1 | GO:0005198 | structural molecule activity |
| 11 | 4.3⋅10-6 | 7/168 (4.2%) | 13.9 | GO:0016651 | oxidoreductase activity, acting on NAD(P)H |
| 12 | 9.2⋅10-6 | 3/8 (37.5%) | 124.8 | GO:0003959 | NADPH dehydrogenase activity |
| 13 | 3.4⋅10-5 | 5/86 (5.8%) | 19.3 | GO:0019843 | rRNA binding |
| 14 | 1.1⋅10-4 | 3/18 (16.7%) | 55.5 | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism |
| 15 | 1.2⋅10-4 | 5/115 (4.3%) | 14.5 | GO:0015078 | proton transmembrane transporter activity |
| 16 | 3.0⋅10-4 | 7/339 (2.1%) | 6.9 | GO:0046906 | tetrapyrrole binding |
| 17 | 3.8⋅10-4 | 2/5 (40.0%) | 133.1 | GO:0045158 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity |
| 18 | 3.8⋅10-4 | 3/29 (10.3%) | 34.4 | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism |
| 19 | 9.9⋅10-4 | 5/188 (2.7%) | 8.9 | GO:0015077 | monovalent inorganic cation transmembrane transporter activity |
| 20 | 1.8⋅10-3 | 3/50 (6.0%) | 20 | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
| 21 | 2.0⋅10-3 | 3/53 (5.7%) | 18.8 | GO:0051539 | 4 iron, 4 sulfur cluster binding |
| 22 | 2.1⋅10-3 | 3/55 (5.5%) | 18.2 | GO:0034062 | 5'-3' RNA polymerase activity |
| 23 | 2.9⋅10-3 | 12/1457 (0.8%) | 2.7 | GO:0016491 | oxidoreductase activity |
| 24 | 2.9⋅10-3 | 3/63 (4.8%) | 15.8 | GO:0019829 | ATPase-coupled cation transmembrane transporter activity |
| 25 | 3.4⋅10-3 | 6/394 (1.5%) | 5.1 | GO:0048037 | cofactor binding |
| 26 | 4.5⋅10-3 | 3/76 (3.9%) | 13.1 | GO:0042625 | ATPase-coupled ion transmembrane transporter activity |
| 27 | 4.5⋅10-3 | 5/283 (1.8%) | 5.9 | GO:0022890 | inorganic cation transmembrane transporter activity |
| 28 | 4.7⋅10-3 | 4/170 (2.4%) | 7.8 | GO:0016779 | nucleotidyltransferase activity |
| 29 | 5.2⋅10-3 | 3/82 (3.7%) | 12.2 | GO:0022853 | active ion transmembrane transporter activity |
| 30 | 1.3⋅10-2 | 3/115 (2.6%) | 8.7 | GO:0051536 | iron-sulfur cluster binding |
| 31 | 1.3⋅10-2 | 3/115 (2.6%) | 8.7 | GO:0051540 | metal cluster binding |
| 32 | 1.8⋅10-2 | 5/406 (1.2%) | 4.1 | GO:0008324 | cation transmembrane transporter activity |
| 33 | 3.0⋅10-2 | 3/165 (1.8%) | 6.1 | GO:0043492 | ATPase activity, coupled to movement of substances |
| 34 | 3.0⋅10-2 | 3/164 (1.8%) | 6.1 | GO:0042626 | ATPase-coupled transmembrane transporter activity |
| 35 | 3.0⋅10-2 | 4/304 (1.3%) | 4.4 | GO:0005506 | iron ion binding |
| 36 | 4.3⋅10-2 | 2/72 (2.8%) | 9.2 | GO:0051082 | unfolded protein binding |
| Gene Ontology: Cellular Component | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Accession | Cellular Component |
| 1 | 1.0⋅10-37 | 39/1305 (3.0%) | 12.7 | GO:0044435 | plastid part |
| 2 | 1.5⋅10-34 | 37/1284 (2.9%) | 12.2 | GO:0044434 | chloroplast part |
| 3 | 8.1⋅10-33 | 45/3443 (1.3%) | 5.5 | GO:0009507 | chloroplast |
| 4 | 1.3⋅10-32 | 45/3502 (1.3%) | 5.4 | GO:0009536 | plastid |
| 5 | 5.3⋅10-31 | 27/480 (5.6%) | 23.8 | GO:0009534 | chloroplast thylakoid |
| 6 | 5.3⋅10-31 | 27/480 (5.6%) | 23.8 | GO:0031976 | plastid thylakoid |
| 7 | 1.5⋅10-29 | 27/546 (4.9%) | 21 | GO:0009579 | thylakoid |
| 8 | 7.0⋅10-29 | 24/365 (6.6%) | 27.9 | GO:0009535 | chloroplast thylakoid membrane |
| 9 | 7.0⋅10-29 | 24/365 (6.6%) | 27.9 | GO:0055035 | plastid thylakoid membrane |
| 10 | 1.9⋅10-28 | 24/382 (6.3%) | 26.6 | GO:0042651 | thylakoid membrane |
| 11 | 2.0⋅10-28 | 24/384 (6.2%) | 26.5 | GO:0034357 | photosynthetic membrane |
| 12 | 1.9⋅10-27 | 24/423 (5.7%) | 24.1 | GO:0044436 | thylakoid part |
| 13 | 6.1⋅10-26 | 27/760 (3.6%) | 15.1 | GO:0031984 | organelle subcompartment |
| 14 | 5.2⋅10-23 | 11/24 (45.8%) | 194.3 | GO:0009547 | plastid ribosome |
| 15 | 1.0⋅10-21 | 33/2112 (1.6%) | 6.6 | GO:0032991 | protein-containing complex |
| 16 | 5.1⋅10-21 | 23/689 (3.3%) | 14.2 | GO:0009532 | plastid stroma |
| 17 | 2.0⋅10-20 | 11/38 (28.9%) | 122.7 | GO:0000313 | organellar ribosome |
| 18 | 1.5⋅10-19 | 39/4173 (0.9%) | 4 | GO:0044446 | intracellular organelle part |
| 19 | 1.6⋅10-19 | 39/4184 (0.9%) | 4 | GO:0044422 | organelle part |
| 20 | 1.6⋅10-18 | 21/669 (3.1%) | 13.3 | GO:0009570 | chloroplast stroma |
| 21 | 1.1⋅10-15 | 45/8599 (0.5%) | 2.2 | GO:0044444 | cytoplasmic part |
| 22 | 1.6⋅10-14 | 10/83 (12.0%) | 51.1 | GO:0009521 | photosystem |
| 23 | 7.6⋅10-13 | 15/491 (3.1%) | 13 | GO:0098796 | membrane protein complex |
| 24 | 7.6⋅10-13 | 6/13 (46.2%) | 195.7 | GO:0000312 | plastid small ribosomal subunit |
| 25 | 9.6⋅10-12 | 45/10564 (0.4%) | 1.8 | GO:0005737 | cytoplasm |
| 26 | 1.6⋅10-11 | 6/20 (30.0%) | 127.2 | GO:0000314 | organellar small ribosomal subunit |
| 27 | 4.2⋅10-11 | 11/254 (4.3%) | 18.4 | GO:0044391 | ribosomal subunit |
| 28 | 8.4⋅10-11 | 5/11 (45.5%) | 192.7 | GO:0000311 | plastid large ribosomal subunit |
| 29 | 1.7⋅10-10 | 12/382 (3.1%) | 13.3 | GO:0005840 | ribosome |
| 30 | 5.8⋅10-10 | 7/67 (10.4%) | 44.3 | GO:0010287 | plastoglobule |
| 31 | 1.4⋅10-9 | 5/18 (27.8%) | 117.8 | GO:0000315 | organellar large ribosomal subunit |
| 32 | 1.4⋅10-8 | 6/59 (10.2%) | 43.1 | GO:0009523 | photosystem II |
| 33 | 4.3⋅10-8 | 12/629 (1.9%) | 8.1 | GO:1990904 | ribonucleoprotein complex |
| 34 | 2.1⋅10-7 | 4/18 (22.2%) | 94.2 | GO:0005761 | mitochondrial ribosome |
| 35 | 4.8⋅10-7 | 11/637 (1.7%) | 7.3 | GO:0009526 | plastid envelope |
| 36 | 8.1⋅10-7 | 4/25 (16.0%) | 67.8 | GO:0045259 | proton-transporting ATP synthase complex |
| 37 | 8.3⋅10-7 | 6/119 (5.0%) | 21.4 | GO:0015935 | small ribosomal subunit |
| 38 | 1.6⋅10-6 | 45/13924 (0.3%) | 1.4 | GO:0043227 | membrane-bounded organelle |
| 39 | 1.6⋅10-6 | 45/13921 (0.3%) | 1.4 | GO:0043231 | intracellular membrane-bounded organelle |
| 40 | 2.9⋅10-6 | 3/10 (30.0%) | 127.2 | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) |
| 41 | 2.9⋅10-6 | 45/14156 (0.3%) | 1.3 | GO:0043226 | organelle |
| 42 | 2.9⋅10-6 | 45/14153 (0.3%) | 1.3 | GO:0043229 | intracellular organelle |
| 43 | 2.9⋅10-6 | 10/619 (1.6%) | 6.8 | GO:0009941 | chloroplast envelope |
| 44 | 2.9⋅10-6 | 4/35 (11.4%) | 48.5 | GO:0009522 | photosystem I |
| 45 | 5.1⋅10-6 | 4/41 (9.8%) | 41.4 | GO:0016469 | proton-transporting two-sector ATPase complex |
| 46 | 1.9⋅10-5 | 3/18 (16.7%) | 70.7 | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain |
| 47 | 2.9⋅10-5 | 5/134 (3.7%) | 15.8 | GO:0015934 | large ribosomal subunit |
| 48 | 3.2⋅10-5 | 11/1016 (1.1%) | 4.6 | GO:0031967 | organelle envelope |
| 49 | 3.2⋅10-5 | 11/1016 (1.1%) | 4.6 | GO:0031975 | envelope |
| 50 | 4.1⋅10-5 | 12/1254 (1.0%) | 4.1 | GO:0043228 | non-membrane-bounded organelle |
| 51 | 4.1⋅10-5 | 12/1254 (1.0%) | 4.1 | GO:0043232 | intracellular non-membrane-bounded organelle |
| 52 | 9.0⋅10-5 | 3/31 (9.7%) | 41 | GO:0098807 | chloroplast thylakoid membrane protein complex |
| 53 | 9.1⋅10-5 | 2/5 (40.0%) | 169.6 | GO:0009544 | chloroplast ATP synthase complex |
| 54 | 1.3⋅10-4 | 2/6 (33.3%) | 141.3 | GO:0009512 | cytochrome b6f complex |
| 55 | 2.3⋅10-4 | 4/112 (3.6%) | 15.1 | GO:0005759 | mitochondrial matrix |
| 56 | 2.4⋅10-4 | 2/8 (25.0%) | 106 | GO:0009533 | chloroplast stromal thylakoid |
| 57 | 2.9⋅10-4 | 3/47 (6.4%) | 27.1 | GO:0009295 | nucleoid |
| 58 | 2.9⋅10-4 | 2/9 (22.2%) | 94.2 | GO:0005763 | mitochondrial small ribosomal subunit |
| 59 | 2.9⋅10-4 | 2/9 (22.2%) | 94.2 | GO:0005762 | mitochondrial large ribosomal subunit |
| 60 | 3.9⋅10-4 | 45/15887 (0.3%) | 1.2 | GO:0044424 | intracellular part |
| 61 | 4.2⋅10-4 | 45/15923 (0.3%) | 1.2 | GO:0005622 | intracellular |
| 62 | 4.2⋅10-4 | 2/11 (18.2%) | 77.1 | GO:0009539 | photosystem II reaction center |
| 63 | 6.3⋅10-4 | 28/7006 (0.4%) | 1.7 | GO:0016020 | membrane |
| 64 | 2.0⋅10-3 | 2/24 (8.3%) | 35.3 | GO:0070069 | cytochrome complex |
| 65 | 2.2⋅10-3 | 21/4840 (0.4%) | 1.8 | GO:0044425 | membrane part |
| 66 | 3.6⋅10-3 | 3/118 (2.5%) | 10.8 | GO:1990204 | oxidoreductase complex |
| 67 | 3.6⋅10-3 | 6/600 (1.0%) | 4.2 | GO:1902494 | catalytic complex |
| 68 | 7.3⋅10-3 | 18/4245 (0.4%) | 1.8 | GO:0016021 | integral component of membrane |
| 69 | 8.5⋅10-3 | 2/52 (3.8%) | 16.3 | GO:0030964 | NADH dehydrogenase complex |
| 70 | 8.5⋅10-3 | 2/52 (3.8%) | 16.3 | GO:0045271 | respiratory chain complex I |
| 71 | 1.1⋅10-2 | 18/4442 (0.4%) | 1.7 | GO:0031224 | intrinsic component of membrane |
| 72 | 1.4⋅10-2 | 2/69 (2.9%) | 12.3 | GO:0000428 | DNA-directed RNA polymerase complex |
| 73 | 1.4⋅10-2 | 2/69 (2.9%) | 12.3 | GO:0030880 | RNA polymerase complex |
| 74 | 1.8⋅10-2 | 2/80 (2.5%) | 10.6 | GO:0098803 | respiratory chain complex |
| 75 | 1.9⋅10-2 | 4/412 (1.0%) | 4.1 | GO:0044429 | mitochondrial part |
| 76 | 2.4⋅10-2 | 2/94 (2.1%) | 9 | GO:0070469 | respirasome |
| 77 | 2.7⋅10-2 | 2/101 (2.0%) | 8.4 | GO:0061695 | transferase complex, transferring phosphorus-containing groups |
| 78 | 2.7⋅10-2 | 3/261 (1.1%) | 4.9 | GO:0022626 | cytosolic ribosome |
| 79 | 2.8⋅10-2 | 45/17575 (0.3%) | 1.1 | GO:0044464 | cell part |
| 80 | 2.9⋅10-2 | 45/17595 (0.3%) | 1.1 | GO:0005623 | cell |
| 81 | 3.7⋅10-2 | 3/301 (1.0%) | 4.2 | GO:0044445 | cytosolic part |
| Plant Ontology: Plant Anatomy | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Accession | Plant Anatomy |
| 1 | 3.7⋅10-8 | 45/12259 (0.4%) | 1.6 | PO:0025099 | embryo plant structure |
| 2 | 3.7⋅10-8 | 45/12250 (0.4%) | 1.6 | PO:0020030 | cotyledon |
| 3 | 3.7⋅10-8 | 45/12233 (0.4%) | 1.6 | PO:0025233 | portion of embryo plant tissue |
| 4 | 3.7⋅10-8 | 45/12221 (0.4%) | 1.6 | PO:0000015 | cotyledon primordium |
| 5 | 3.7⋅10-8 | 45/12221 (0.4%) | 1.6 | PO:0025432 | cotyledon anlagen |
| 6 | 5.6⋅10-8 | 45/12419 (0.4%) | 1.5 | PO:0020038 | petiole |
| 7 | 5.6⋅10-8 | 45/12463 (0.4%) | 1.5 | PO:0025066 | stalk |
| 8 | 5.7⋅10-8 | 45/12619 (0.4%) | 1.5 | PO:0025060 | lamina |
| 9 | 5.7⋅10-8 | 45/12619 (0.4%) | 1.5 | PO:0025396 | phyllome lamina |
| 10 | 5.7⋅10-8 | 45/12619 (0.4%) | 1.5 | PO:0025513 | plant organ lamina |
| 11 | 5.7⋅10-8 | 45/12607 (0.4%) | 1.5 | PO:0020039 | leaf lamina |
| 12 | 5.7⋅10-8 | 45/12582 (0.4%) | 1.5 | PO:0008019 | leaf lamina base |
| 13 | 9.5⋅10-8 | 45/12807 (0.4%) | 1.5 | PO:0020137 | leaf apex |
| 14 | 9.5⋅10-8 | 45/12807 (0.4%) | 1.5 | PO:0025139 | phyllome apex |
| 15 | 1.3⋅10-7 | 45/12918 (0.3%) | 1.5 | PO:0000013 | cauline leaf |
| 16 | 1.5⋅10-7 | 45/12971 (0.3%) | 1.5 | PO:0000230 | inflorescence meristem |
| 17 | 4.1⋅10-7 | 44/12404 (0.4%) | 1.5 | PO:0025017 | plant spore |
| 18 | 4.1⋅10-7 | 44/12395 (0.4%) | 1.5 | PO:0020048 | microspore |
| 19 | 4.1⋅10-7 | 44/12384 (0.4%) | 1.5 | PO:0025280 | microgametophyte |
| 20 | 4.1⋅10-7 | 44/12384 (0.4%) | 1.5 | PO:0025281 | pollen |
| 21 | 4.2⋅10-7 | 44/12457 (0.4%) | 1.5 | PO:0025094 | sporangium |
| 22 | 4.2⋅10-7 | 44/12451 (0.4%) | 1.5 | PO:0025202 | microsporangium |
| 23 | 4.2⋅10-7 | 44/12431 (0.4%) | 1.5 | PO:0025277 | pollen sac |
| 24 | 7.3⋅10-7 | 45/13586 (0.3%) | 1.4 | PO:0009081 | higher order inflorescence axis |
| 25 | 7.3⋅10-7 | 45/13586 (0.3%) | 1.4 | PO:0025073 | branch |
| 26 | 7.3⋅10-7 | 45/13585 (0.3%) | 1.4 | PO:0009052 | inflorescence flower pedicel |
| 27 | 7.4⋅10-7 | 45/13599 (0.3%) | 1.4 | PO:0020122 | inflorescence axis |
| 28 | 1.6⋅10-6 | 45/13901 (0.3%) | 1.4 | PO:0009027 | megasporophyll |
| 29 | 1.6⋅10-6 | 45/13901 (0.3%) | 1.4 | PO:0009030 | carpel |
| 30 | 1.6⋅10-6 | 45/13899 (0.3%) | 1.4 | PO:0004705 | stamen primordium |
| 31 | 1.6⋅10-6 | 45/13899 (0.3%) | 1.4 | PO:0025486 | stamen anlagen |
| 32 | 1.6⋅10-6 | 45/13875 (0.3%) | 1.4 | PO:0004703 | carpel primordium |
| 33 | 1.6⋅10-6 | 45/13875 (0.3%) | 1.4 | PO:0006005 | carpel anlagen |
| 34 | 2.0⋅10-6 | 45/13986 (0.3%) | 1.4 | PO:0009028 | microsporophyll |
| 35 | 2.0⋅10-6 | 45/13984 (0.3%) | 1.4 | PO:0009029 | stamen |
| 36 | 2.0⋅10-6 | 45/13984 (0.3%) | 1.4 | PO:0009061 | androecium |
| 37 | 2.0⋅10-6 | 45/13997 (0.3%) | 1.4 | PO:0000018 | ovule primordium |
| 38 | 2.0⋅10-6 | 45/14022 (0.3%) | 1.4 | PO:0009010 | seed |
| 39 | 2.0⋅10-6 | 45/14015 (0.3%) | 1.4 | PO:0020003 | plant ovule |
| 40 | 2.1⋅10-6 | 45/14047 (0.3%) | 1.4 | PO:0009062 | gynoecium |
| 41 | 2.7⋅10-6 | 45/14136 (0.3%) | 1.4 | PO:0005005 | shoot axis internode |
| 42 | 2.7⋅10-6 | 45/14136 (0.3%) | 1.4 | PO:0020100 | hypocotyl |
| 43 | 2.7⋅10-6 | 45/14136 (0.3%) | 1.4 | PO:0020142 | stem internode |
| 44 | 5.0⋅10-6 | 45/14341 (0.3%) | 1.3 | PO:0000037 | shoot axis apex |
| 45 | 1.1⋅10-5 | 45/14625 (0.3%) | 1.3 | PO:0009032 | petal |
| 46 | 1.1⋅10-5 | 45/14625 (0.3%) | 1.3 | PO:0009059 | corolla |
| 47 | 1.1⋅10-5 | 45/14620 (0.3%) | 1.3 | PO:0000021 | petal primordium |
| 48 | 1.1⋅10-5 | 45/14620 (0.3%) | 1.3 | PO:0025484 | petal anlagen |
| 49 | 1.8⋅10-5 | 45/14788 (0.3%) | 1.3 | PO:0009049 | inflorescence |
| 50 | 2.0⋅10-5 | 45/14844 (0.3%) | 1.3 | PO:0005029 | root primordium |
| 51 | 2.0⋅10-5 | 45/14844 (0.3%) | 1.3 | PO:0025433 | root anlagen |
| 52 | 2.3⋅10-5 | 45/14901 (0.3%) | 1.3 | PO:0000017 | vascular leaf primordium |
| 53 | 2.3⋅10-5 | 45/14900 (0.3%) | 1.3 | PO:0025431 | vascular leaf anlagen |
| 54 | 2.3⋅10-5 | 45/14914 (0.3%) | 1.3 | PO:0009026 | sporophyll |
| 55 | 2.3⋅10-5 | 45/14908 (0.3%) | 1.3 | PO:0009005 | root |
| 56 | 2.6⋅10-5 | 45/14959 (0.3%) | 1.3 | PO:0009025 | vascular leaf |
| 57 | 2.6⋅10-5 | 45/14966 (0.3%) | 1.3 | PO:0025025 | root system |
| 58 | 3.7⋅10-5 | 45/15084 (0.3%) | 1.3 | PO:0009009 | plant embryo |
| 59 | 3.8⋅10-5 | 45/15102 (0.3%) | 1.3 | PO:0025034 | leaf |
| 60 | 4.0⋅10-5 | 45/15128 (0.3%) | 1.3 | PO:0025498 | cardinal part of multi-tissue plant structure |
| 61 | 4.0⋅10-5 | 45/15127 (0.3%) | 1.3 | PO:0025001 | cardinal organ part |
| 62 | 8.4⋅10-5 | 45/15391 (0.3%) | 1.2 | PO:0004704 | sepal primordium |
| 63 | 8.4⋅10-5 | 45/15391 (0.3%) | 1.2 | PO:0025485 | sepal anlagen |
| 64 | 8.4⋅10-5 | 45/15404 (0.3%) | 1.2 | PO:0009031 | sepal |
| 65 | 8.4⋅10-5 | 45/15404 (0.3%) | 1.2 | PO:0009060 | calyx |
| 66 | 8.7⋅10-5 | 45/15419 (0.3%) | 1.2 | PO:0009047 | stem |
| 67 | 2.2⋅10-4 | 45/15745 (0.3%) | 1.2 | PO:0025022 | collective leaf structure |
| 68 | 2.2⋅10-4 | 45/15752 (0.3%) | 1.2 | PO:0009058 | perianth |
| 69 | 8.6⋅10-4 | 45/16238 (0.3%) | 1.2 | PO:0025395 | floral organ |
| 70 | 1.0⋅10-3 | 45/16310 (0.3%) | 1.2 | PO:0004010 | meristematic cell |
| 71 | 1.1⋅10-3 | 45/16347 (0.3%) | 1.2 | PO:0025029 | shoot axis |
| 72 | 1.7⋅10-3 | 45/16512 (0.3%) | 1.2 | PO:0006079 | shoot system meristem |
| 73 | 1.7⋅10-3 | 45/16511 (0.3%) | 1.2 | PO:0020148 | shoot apical meristem |
| 74 | 1.7⋅10-3 | 45/16506 (0.3%) | 1.2 | PO:0000229 | flower meristem |
| 75 | 1.7⋅10-3 | 45/16506 (0.3%) | 1.2 | PO:0008028 | reproductive shoot apical meristem |
| 76 | 1.7⋅10-3 | 45/16522 (0.3%) | 1.2 | PO:0020144 | apical meristem |
| 77 | 2.2⋅10-3 | 45/16616 (0.3%) | 1.2 | PO:0025477 | floral organ primordium |
| 78 | 2.2⋅10-3 | 45/16625 (0.3%) | 1.2 | PO:0025023 | collective phyllome structure |
| 79 | 2.4⋅10-3 | 45/16672 (0.3%) | 1.2 | PO:0025128 | phyllome primordium |
| 80 | 2.4⋅10-3 | 45/16672 (0.3%) | 1.2 | PO:0025430 | phyllome anlagen |
| 81 | 2.9⋅10-3 | 45/16747 (0.3%) | 1.1 | PO:0006001 | phyllome |
| 82 | 4.7⋅10-3 | 45/16932 (0.3%) | 1.1 | PO:0000003 | whole plant |
| 83 | 6.9⋅10-3 | 45/17080 (0.3%) | 1.1 | PO:0025004 | plant axis |
| 84 | 9.5⋅10-3 | 45/17205 (0.3%) | 1.1 | PO:0009046 | flower |
| 85 | 1.1⋅10-2 | 45/17256 (0.3%) | 1.1 | PO:0025082 | reproductive shoot system |
| 86 | 1.7⋅10-2 | 45/17450 (0.3%) | 1.1 | PO:0009002 | plant cell |
| 87 | 1.7⋅10-2 | 45/17450 (0.3%) | 1.1 | PO:0025606 | native plant cell |
| 88 | 3.6⋅10-2 | 45/17741 (0.3%) | 1.1 | PO:0025127 | primordium |
| Plant Ontology: Plant Structure Development Stage | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Accession | Plant Structure Development Stage |
| 1 | 1.6⋅10-7 | 45/12130 (0.4%) | 1.5 | PO:0007095 | LP.08 eight leaves visible stage |
| 2 | 1.6⋅10-7 | 45/12109 (0.4%) | 1.5 | PO:0007064 | LP.12 twelve leaves visible stage |
| 3 | 1.8⋅10-7 | 45/12273 (0.4%) | 1.5 | PO:0007098 | LP.02 two leaves visible stage |
| 4 | 3.0⋅10-7 | 45/12503 (0.4%) | 1.5 | PO:0007123 | LP.06 six leaves visible stage |
| 5 | 3.1⋅10-7 | 45/12844 (0.4%) | 1.4 | PO:0001050 | leaf development stage |
| 6 | 3.1⋅10-7 | 45/12844 (0.4%) | 1.4 | PO:0001051 | vascular leaf initiation stage |
| 7 | 3.1⋅10-7 | 45/12844 (0.4%) | 1.4 | PO:0001052 | vascular leaf expansion stage |
| 8 | 3.1⋅10-7 | 45/12844 (0.4%) | 1.4 | PO:0025570 | vascular leaf development stage |
| 9 | 3.1⋅10-7 | 45/12844 (0.4%) | 1.4 | PO:0025574 | vascular leaf differentiation stage |
| 10 | 3.1⋅10-7 | 45/12844 (0.4%) | 1.4 | PO:0025579 | phyllome development stage |
| 11 | 3.1⋅10-7 | 45/12842 (0.4%) | 1.4 | PO:0001053 | vascular leaf post-expansion stage |
| 12 | 3.1⋅10-7 | 45/12841 (0.4%) | 1.4 | PO:0001054 | vascular leaf senescent stage |
| 13 | 3.1⋅10-7 | 45/12600 (0.4%) | 1.5 | PO:0007103 | LP.10 ten leaves visible stage |
| 14 | 4.2⋅10-6 | 45/13626 (0.3%) | 1.3 | PO:0007115 | LP.04 four leaves visible stage |
| 15 | 7.8⋅10-6 | 45/13838 (0.3%) | 1.3 | PO:0001078 | plant embryo cotyledonary stage |
| 16 | 1.2⋅10-5 | 45/14029 (0.3%) | 1.3 | PO:0007112 | 1 main shoot growth stage |
| 17 | 1.2⋅10-5 | 45/14028 (0.3%) | 1.3 | PO:0007133 | leaf production stage |
| 18 | 1.2⋅10-5 | 45/14015 (0.3%) | 1.3 | PO:0001081 | mature plant embryo stage |
| 19 | 1.7⋅10-5 | 45/14154 (0.3%) | 1.3 | PO:0004507 | plant embryo bilateral stage |
| 20 | 1.2⋅10-4 | 45/14788 (0.3%) | 1.2 | PO:0001083 | inflorescence development stage |
| 21 | 1.8⋅10-4 | 45/14963 (0.3%) | 1.2 | PO:0001180 | plant proembryo stage |
| 22 | 1.8⋅10-4 | 45/14963 (0.3%) | 1.2 | PO:0001185 | plant embryo globular stage |
| 23 | 2.0⋅10-4 | 45/15016 (0.3%) | 1.2 | PO:0007631 | plant embryo development stage |
| 24 | 3.1⋅10-3 | 45/15979 (0.3%) | 1.2 | PO:0007134 | sporophyte vegetative stage |
| 25 | 3.1⋅10-3 | 45/15976 (0.3%) | 1.2 | PO:0001097 | plant zygote stage |
| 26 | 4.7⋅10-3 | 45/16154 (0.3%) | 1.1 | PO:0025588 | flower meristem transition stage |
| 27 | 4.7⋅10-3 | 45/16153 (0.3%) | 1.1 | PO:0007616 | flowering stage |
| 28 | 9.5⋅10-3 | 45/16437 (0.3%) | 1.1 | PO:0007604 | corolla development stage |
| 29 | 9.5⋅10-3 | 45/16437 (0.3%) | 1.1 | PO:0007611 | petal differentiation and expansion stage |
| 30 | 1.1⋅10-2 | 45/16507 (0.3%) | 1.1 | PO:0025337 | life of whole plant stage |
| 31 | 1.9⋅10-2 | 45/16738 (0.3%) | 1.1 | PO:0007600 | floral organ differentiation stage |
| 32 | 1.9⋅10-2 | 45/16738 (0.3%) | 1.1 | PO:0025578 | collective phyllome structure development stage |
| WikiPathways | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | WikiPathways | Description |
| KEGG | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Entry | Name |
| AraCyc | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | PathwayID | Pathway Name |
| 1 | 1.3⋅10-8 | 7/45 (15.6%) | 26.3 | PWY-101 | photosynthesis light reactions |
| 2 | 6.2⋅10-5 | 4/30 (13.3%) | 22.5 | PWY-7219 | adenosine ribonucleotides de novo biosynthesis |
| 3 | 1.8⋅10-4 | 4/43 (9.3%) | 15.7 | PWY-5083 | NAD/NADH phosphorylation and dephosphorylation |
| 4 | 3.0⋅10-4 | 4/56 (7.1%) | 12.1 | PWY-4302 | aerobic respiration III (alternative oxidase pathway) |
| 5 | 3.0⋅10-4 | 4/54 (7.4%) | 12.5 | PWY-841 | superpathway of purine nucleotides de novo biosynthesis I |
| 6 | 4.2⋅10-4 | 4/64 (6.2%) | 10.6 | PWY-3781 | aerobic respiration I (cytochrome c) |
| AtRegNet | ||||||
|---|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | TF Symbol | TF Name | TF Description |
| Plant Cistrome Database | ||||||
|---|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | TF Symbol | TF Name | TF Description |
| Pfam | |||||
|---|---|---|---|---|---|
| Rank | Pvalue | Hits | Over-representation | Family | Summary |
| 1 | 1.3⋅10-5 | 2/2 (100.0%) | 383.7 | Photo_RC | Photosynthetic reaction centre protein |
| 2 | 1.3⋅10-5 | 2/2 (100.0%) | 383.7 | PSII | Photosystem II protein |
| 3 | 2.7⋅10-5 | 2/3 (66.7%) | 255.8 | Proton_antipo_M | Proton-conducting membrane transporter |
| 4 | 1.4⋅10-4 | 2/7 (28.6%) | 109.6 | RNA_pol_Rpb1_3 | RNA polymerase Rpb1, domain 3 |
| yellowgreen Module: 45 genes | ||||
|---|---|---|---|---|
| Probeset | Symbol | Name | Description | Average Ranking |
| ATCG00140_at | ATPH | ATP synthase subunit C family protein | 12.083386845244 | |
| ATCG00520_at | YCF4 | unfolded protein binding protein | 12.823961104486 | |
| ATCG00130_at | ATPF | ATPase, F0 complex, subunit B/B', bacterial/chloroplast | 13.037060820108 | |
| ATCG00180_at | RPOC1 | DNA-directed RNA polymerase family protein | 13.345105953582 | |
| ATCG00680_at | PSBB | photosystem II reaction center protein B | photosystem II reaction center protein B | 13.719612879552 |
| ATCG00530_at | YCF10 | CemA-like proton extrusion protein-like protein | 14.24392257591 | |
| ATCG00500_at | ACCD | acetyl-CoA carboxylase carboxyl transferase subunit beta | acetyl-CoA carboxylase carboxyl transferase subunit beta | 14.450692597009 |
| ATCG00670_at | PCLPP | plastid-encoded CLP P | plastid-encoded CLP P | 14.780891661315 |
| ATCG01070_at | NDHE | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | 14.854738097422 | |
| ATCG00160_at | RPS2 | ribosomal protein S2 | ribosomal protein S2 | 14.871617282818 |
| ATCG01060_at | PSAC | iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding protein | 15.447619484451 | |
| ATCG00270_at | PSBD | photosystem II reaction center protein D | photosystem II reaction center protein D | 17.568067149803 |
| ATCG00710_at | PSBH | photosystem II reaction center protein H | photosystem II reaction center protein H | 18.154618842308 |
| ATCG01080_at | NDHG | NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 | 18.674708742317 | |
| ATCG00430_at | PSBG | photosystem II reaction center protein G | photosystem II reaction center protein G | 19.399458765251 |
| ATCG01050_at | NDHD | NADH-plastoquinone oxidoreductase subunit | 20.185395835244 | |
| ATCG00820_at | RPS19 | ribosomal protein S19 | ribosomal protein S19 | 20.193835427942 |
| ATCG01110_at | NDHH | NAD(P)H dehydrogenase subunit H | NAD(P)H dehydrogenase subunit H | 20.332033758371 |
| ATCG00600_at | PETG | PETG | 20.889046876433 | |
| ATCG00150_at | ATPI | ATPase, F0 complex, subunit A protein | 20.923860196312 | |
| ATCG00350_at | PSAA | Photosystem I, PsaA/PsaB protein | 21.243509769746 | |
| ATCG00120_at | ATPA | ATP synthase subunit alpha | ATP synthase subunit alpha | 21.449224841758 |
| ATCG00510_at | PSAI | photsystem I subunit I | photsystem I subunit I | 21.454499587194 |
| ATCG00490_at | RBCL | ribulose-bisphosphate carboxylase | 21.604302357582 | |
| ATCG00790_at | RPL16 | ribosomal protein L16 | ribosomal protein L16 | 21.989358774424 |
| ATCG00420_at | NDHJ | NADH dehydrogenase subunit J | NADH dehydrogenase subunit J | 22.494679387212 |
| ATCG00540_at | PETA | photosynthetic electron transfer A | photosynthetic electron transfer A | 23.254242730025 |
| ATCG00770_at | RPS8 | ribosomal protein S8 | ribosomal protein S8 | 23.622419961471 |
| ATCG00280_at | PSBC | photosystem II reaction center protein C | photosystem II reaction center protein C | 24.366159067975 |
| ATCG00050_at | RPS16 | ribosomal protein S16 | ribosomal protein S16 | 24.827171819099 |
| ATCG00170_at | RPOC2 | DNA-directed RNA polymerase family protein | 25.775571048528 | |
| ATCG01040_at | YCF5 | Cytochrome C assembly protein | 26.585771947528 | |
| ATCG00040_at | MATK | maturase K | maturase K | 26.872718099257 |
| ATCG00590_at | ORF31 | electron carrier | 27.175488487295 | |
| ATCG00065_at | RPS12A | ribosomal protein S12A | ribosomal protein S12A | 28.77479130355 |
| ATCG00020_at | PSBA | photosystem II reaction center protein A | photosystem II reaction center protein A | 29.013209797266 |
| ATCG00660_at | RPL20 | ribosomal protein L20 | ribosomal protein L20 | 29.247408494634 |
| ATCG00210_at | YCF6 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II | 29.282221814512 | |
| ATCG00360_at | YCF3 | photosystem I assembly protein | 33.18131364095 | |
| ATCG00760_at | RPL36 | ribosomal protein L36 | ribosomal protein L36 | 33.666590221081 |
| ATCG00780_at | RPL14 | ribosomal protein L14 | ribosomal protein L14 | 34.10650399046 |
| ATCG01020_at | RPL32 | ribosomal protein L32 | ribosomal protein L32 | 36.472754793138 |
| ATCG00740_at | RPOA | RNA polymerase subunit alpha | RNA polymerase subunit alpha | 38.848500137602 |
| ATCG01010_at | NDHF | NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein | 39.063709751399 | |
| ATCG00750_at | RPS11 | ribosomal protein S11 | ribosomal protein S11 | 40.648243280433 |
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